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microbial-ecology

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Microbial ecology examines how communities of microorganisms interact with each other and their surrounding environments, including the complex ecosystems found in soil and on plant surfaces. For plant scientists, understanding these microbial communities is essential because bacteria, fungi, and other microbes profoundly influence plant health, nutrient uptake, and stress resilience. Insights from this field are driving advances in sustainable agriculture by revealing how plants recruit and shape their own microbiomes to promote growth and defend against pathogens.

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soil-health
PubMed → · research article

Reduced legacy precipitation decreases microbial community growth e...

Drier winters — increasingly common with climate change — can quietly degrade the soil health ben...

soil-health
PubMed → · research article

Pesticides and the microbial world: a review of disturbance, resili...

The vegetables in your garden depend on billions of soil microbes to break down nutrients into fo...

plant-signaling
PubMed → · research article

Beyond a Plant Hormone: Ethylene Receptors and Signaling in Microbes.

Bacteria living in your garden soil and on your plants' roots can sense the same ripening signals...

phytoremediation
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Identifying microbial candidates for assisted phytoremediation thro...

Millions of acres of old mining land sit barren and leaching toxic metals into nearby waterways —...

soil-health
PubMed → · research article

Drought-induced shifts in soil microbial communities and carbon dyn...

When the soil beneath your vegetable beds dries out, the microbial workforce that converts compos...

soil-health
PubMed → · research article

Microbial consortia interactions and bioremediation of pesticides: ...

Pesticides sprayed on the crops you eat don't just disappear — they linger in soil, affect plant ...

soil-health
PubMed → · research article

Bacterial-fungal interactions: connections and consequences.

The invisible web of bacteria and fungi living in your garden soil is more like a coordinated com...

PubMed → · research article

Bacterial Diversity and Functional Dynamics in the Soybean (Glycine...

The compost you choose for your vegetable bed isn't just feeding your plants — it's curating an e...

bioremediation
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Biodegradation of chlorpyrifos by the newly isolated Escherichia fe...

Pesticides sprayed on crops can linger in soil and water long after harvest, potentially ending u...

PubMed → · research article

Effects of different cultivation methods on microbial community str...

If you grow lettuce in containers or a hydroponic setup, the microbial world living on your plant...

PubMed → · research article

Organic fertilizer regulates multispecies biofilm formation and str...

Compost and organic amendments you add to garden beds don't just feed your plants — they're quiet...

soil-health
PubMed → · research article

Plant and bacterial diversity co-regulate ecosystem multifunctional...

Mixing clovers and wildflowers into a grass-only lawn patch or meadow strip doesn't just add colo...

phytoremediation
PubMed → · research article

Beyond Metal(loid) Immobilization: Redox-Stratified Biocrusts Shiel...

It means the humble living crust forming on old mine dumps near your community is actively protec...

soil-health
PubMed → · research article

Divergent Responses of Bacterial Communities to Permafrost Degradat...

Thawing permafrost could release enough carbon to undermine global climate targets, making the so...

phytoremediation
PubMed → · research article

Simultaneous phenanthrene biodegradation and carbon mineralization ...

The rivers and lakes near petroleum pipelines that feed your city's water supply could one day be...

soil-health
PubMed → · research article

Identification of silage bacterial clusters and analysis of their m...

The fermented grass and corn crops stored as silage on farms feed the livestock that produce your...

phytoremediation
PubMed → · research article

A hybrid approach utilising adaptive laboratory evolution and gene ...

Contaminated brownfields and roadside soils laced with asphalt-related chemicals could be cleaned...

plant-signaling
PubMed → · research article

Antimicrobial effectors of plant-associated fungi: multipurpose pro...

The mold attacking your tomatoes or the blight on your roses isn't just fighting your plant—it's ...

phytoremediation
PubMed → · research article

Soil microbes team up with plants to dissolve pollutants naturally

The soil beneath your garden beds is a living filter, and the microbes already in it are your fir...

antibiotic-resistance
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Unveiling the environmental fate and risks of non-heterocyclic sulf...

Antibiotic residues from farms and wastewater seep into the soil where your vegetables grow, quie...

soil-health
PubMed → · research article

Component-specific microbial degradation and humification mechanism...

Your backyard compost pile works differently in winter, and knowing which microbes handle greasy ...

PubMed → · research article

Water kefir as a paradigm for multi-omics and genome-scale metaboli...

Fermented foods and drinks you make or buy at the farmers market depend on living microbial ecosy...

phytoremediation
PubMed → · research article

Operonic architecture of bacterial metal response: envelope constra...

Soil bacteria are already quietly detoxifying the heavy metals in your garden bed — and understan...

composting
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Fast-composting crop straw at scale works but still needs refinement

Compost made from crop straw could replace synthetic fertilizer on farms near you, and the microb...

bioremediation
PubMed → · research article

Paired genomic and proteomic analysis of Acinetobacter towneri from...

Oil spills and plastic pollution don't just harm oceans — they seep into soil, killing the microb...

soil-health
PubMed → · research article

CAZyme fold architecture is conserved between disparate environment...

Every compost pile, every rotting log in your garden, and every bale of straw broken down for mul...

phytoremediation
PubMed → · research article

Microbial remediation of PAHs in aquatic environments: advances, ss...

The creek or pond near your garden accumulates invisible petroleum compounds from road runoff and...

bioremediation
PubMed → · research article

Predictive functional profiling of 16S rRNA genes amplicons reveals...

Microbes like these, once better understood, could be used to detoxify pesticide-laden farmland o...

bioremediation
PubMed → · research article

Thermophilic bacteria mediated dye remediation in water and wastewa...

Textile and industrial dye pollution contaminates rivers and groundwater that irrigate gardens an...

soil-health
PubMed → · research article

Green synergy: advancements in biosurfactant-assisted microbial rem...

Explosive residues from military sites and old industrial areas quietly leach into groundwater an...

soil-health
PubMed → · research article

Enzymatic degradation of four organophosphorus flame retardants by ...

Flame retardant chemicals from furniture, electronics, and building materials wash into soil and ...

phytoremediation
PubMed → · research article

Enhanced anaerobic biodegradation of 17α-ethinylestradiol via a flo...

The synthetic estrogen that passes through sewage treatment plants is quietly feminizing fish in ...

soil-health
PubMed → · research article

Phage-plasmid-like elements are found throughout diverse environmen...

Soil microbes under your garden beds are constantly swapping genetic tools—including antibiotic r...

phytoremediation
PubMed → · research article

Thiosulfate drives vanadium natural attenuation in oligotrophic min...

Old mine tailings can leach toxic metals into surrounding soils for generations, keeping those la...

phytoremediation
PubMed → · research article

Biocatalysis and biodegradation for efficient utilization of liquid...

Soil microbes are quietly dismantling petroleum contamination in the ground beneath brownfields a...

antibiotic-resistance
PubMed → · research article

Microbial interactions with pharmaceutical pollutants: Implications...

Antibiotic-laced runoff from farms and cities soaks into the same soil and groundwater your garde...

soil-health
PubMed → · research article

Dual-BONCAT reveals distinct subpopulations of anabolically active cells.

Beneath every thriving garden bed, billions of soil microbes take turns waking up and going dorma...

soil-health
PubMed → · research article

Uncovering redox-specific biotransformation of organic micropollutants.

Pharmaceuticals you flush and the pesticides used in nearby fields — including herbicides like be...

phytoremediation
PubMed → · research article

Microbial systems for azo dye biodegradation: enzymatic mechanisms,...

Textile dye runoff reaching waterways near your community can persist in soil and water for years...

soil-health
PubMed → · research article

Biodegradation of low-density polyethylene by Paenarthrobacter nico...

Plastic fragments building up in garden and agricultural soils disrupt root systems and leach che...

soil-health
PubMed → · research article

Revisiting the dihaloelimination potential of Dehalococcoides revea...

The fenced-off brownfield at the edge of your neighborhood that's too toxic to plant anything cou...

plastic-degradation
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Role of dienelactone hydrolases in PET biodegradation by flavobacte...

Plastic fragments washing from bottles and packaging into the soil and waterways around your gard...

wood-preservation
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Microbial Contamination, Degradation Characteristics of Dominant Ba...

The same wood-eating bacteria threatening a 800-year-old shipwreck hull are active in waterlogged...

ocean-plastics
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Robustness of microbial quantification methods to seawater in marin...

Plastics washing into coastal waters and beaches break down partly through microbial action, and ...

phytoremediation
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Erratum to "Efficient anaerobic metformin biodegradation driven by ...

Metformin washes off farms and gardens through runoff and irrigation water, accumulating in soils...

phytoremediation
PubMed → · research article

Integrated thermal and biostimulant enhanced bioremediation of CAHs...

Contaminated groundwater beneath old industrial sites often feeds the same aquifer that supplies ...

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