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Multiple origins of the apple seed microbiome: disentangling sexual and asexual transmission pathways.

PubMed · 2026-04-22

Scientists discovered that apple seeds carry their own communities of bacteria, inherited through two distinct pathways: via flower parts (sexual) and through the tree's vascular system (asexual). Surprisingly, nearly half the seed microbiome came from unknown sources, suggesting there are transmission routes yet to be identified.

1

Both sexual (30.3%, via pollen and ovary) and asexual (23.8%, via the tree's vascular spurs) pathways contribute to seed microbiome assembly in apple trees.

2

Branch spurs sampled before bloom had significantly higher bacterial richness and diversity than all other tissue types, including seeds, ovaries, and pollen.

3

45.9% of the apple seed microbiome could not be attributed to any measured source, indicating major unknown transmission routes remain undiscovered.