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Plants can now flip a genetic switch in soil bacteria

Zhong V, Jones MA, Cabales A, Gevorgyan A, Inckemann R

Crop Improvement

If you've ever wished your garden's beneficial soil microbes would kick into gear right when your tomatoes need them, this is the first proof that plants themselves can send that precise command.

Researchers built a chemical signal, a modified amino acid called OMY, that plants can make and release from their roots. When soil bacteria carrying a special engineered 'receiver' sense that signal, they turn on a chosen gene, almost like the plant is texting the bacteria an instruction. The team got this working in Arabidopsis, tomato, and poplar trees, showing the plant can control microbial behavior only in specific tissues or conditions it chooses.

Key Findings

1

Engineered Bacillus subtilis strains were built with an orthogonal aminoacyl-tRNA synthetase/tRNA pair that suppresses amber stop codons only when the noncanonical amino acid OMY is present

2

Arabidopsis, tomato, and poplar were each engineered to biosynthesize OMY using a single added biosynthetic enzyme

3

Plant-derived OMY successfully triggered gene expression in both lab model bacteria and wild soil-derived bacterial strains, with control restricted by plant tissue type and timing

chevron_right Technical Summary

Scientists engineered plants to produce a special molecule that switches on specific genes in nearby soil bacteria, letting the plant essentially flip an 'on' switch for helpful microbial activity exactly when and where it wants.

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Abstract Preview

Original paper

Genetic code expansion enables plant-directed control of bacterial activity.

Microorganisms have the potential to deliver growth-promoting benefits to plants and crops; however, to be useful in a field setting, their gene expression should be programmable and restricted to ...

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Abstract copyright held by the original publisher.

hub This connects to 12 other discoveries — Arabidopsis, Tomato, Poplar crop-improvement, soil-health, plant-signaling +1 more 5 related articles

Species Mentioned

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Species
Arabidopsis

Arabidopsis (rockcress) is a genus of small flowering plants in the cabbage and mustard family, Brassicaceae. Arabidopsis species are native to temperate and subarctic Eurasia and North America, North Africa, and the mountains of eastern tropical Africa. This genus is of great interest since it c...