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Disabling a rice gene makes seeds sprout prematurely in wet conditions

Lee MB, Lee HN, Chu SH, Park YJ, Park CW

Crispr

Rice fields that get hit by rain just before harvest can sprout right on the stalk, and understanding which genes control that hair-trigger response is the first step toward varieties that hold their seeds until you're ready to collect them.

Imagine rice seeds deciding to sprout while still hanging on the plant after a rainy spell before harvest. Researchers found a gene that acts like a brake on that process; when they disabled it using a precise genetic tool, the seeds sprouted far more easily and quickly than normal. This tells us the gene is part of a hormonal control system that keeps seeds dormant until the right moment, and breeders could eventually use this knowledge to grow rice that resists spoiling in the field during wet seasons.

Key Findings

1

CRISPR knockout of OsERF94 produced frameshift mutations causing loss-of-function, and mutant lines showed significantly higher germination rates under pre-harvest sprouting conditions than wild type.

2

Transcriptome analysis revealed upregulation of gibberellin biosynthesis genes (OsKO3, OsGA3ox2) and downregulation of a GA deactivation gene (OsGA2ox5) in mutant lines, implicating GA metabolism in the sprouting response.

3

Whole-genome resequencing detected few or no off-target mutations in both edited lines, confirming high editing precision.

chevron_right Technical Summary

Scientists used CRISPR gene editing to knock out a gene called OsERF94 in rice, which caused seeds to sprout prematurely on the plant before harvest. The findings suggest this gene normally suppresses early germination by moderating hormones that trigger sprouting, making it a target for breeding more weather-resilient rice varieties.

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Abstract Preview

Original paper

CRISPR/Cas9-Mediated Mutagenesis of OsERF94 Enhances Pre-Harvest Sprouting in Rice.

Pre-harvest sprouting (PHS), where seeds germinate on panicles before harvest under humid conditions, is a serious global issue in cereal crop production, including rice. Fine-mapping of the previo...

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Abstract copyright held by the original publisher.

hub This connects to 11 other discoveries — Rice crispr, crop-improvement, seed-saving +2 more 5 related articles

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